rs30077072 SNP Detail

Summary

• ID
  rs30077072
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:67055943 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CGCTG GAGACCTCAG CAGTCTACAC
  Y
  GCACCCCGGG GAAAAGAAAT CTAAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39148490	mCV23328751	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T	T
ss149258999	ENSMUSSNP1065779	ENSEMBL	ENSEMBL_Sanger	r	SNP		G	A		A
ss324388728	CHEV_13_67008815	CHEVERUD	SCREENING_POP	r	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30077072					SNP	C	C	T	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:67055943 () rs orientation: reverse

Symbol	Name	Function Class
Mterf3	mitochondrial transcription termination factor 3	within coordinates
Ramacl	RNA guanine-7 methyltransferase activating subunit like	within coordinates
Rr273407	regulatory region 273407	143 bp distal
Rr281575	regulatory region 281575	1742 bp distal