rs30081928 SNP Detail

Summary

• ID
  rs30081928
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115570967 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGTGTGT GTGTGGGGGG
  ATATATGCTA GTACTATAGA CATTTTCAAT ACGTTTTTAA TTTTTTTTAC CTTTGTATAT
  GTGCATGCAT GACATACACA TGCTGAGAGA GGATCAGAAG ACTACCCTGC GTGCTGGTCT
  TGCCTTCCCT CTTATTTGAG ACAGAATCTC TTTGTTGTTT TCCTGCTGTG GATGCCAGGT
  M
  AGCTGGCTCA TGGACATCCT GGGTTTGTTT GTTTGTTTGT TTGTTTGTTG TTTTGTGTTG
  TTTTGTTTTG TTTGTCCTTG CCTTCCATCA ACCATAGAAA CCCTGGATTA TAGACACCCA
  TACTGCAGCA CCTGGCTTTC ACATGGGTTC TGGGGATTCA AACTCTGATA CTCACATTTG
  CATGCAAGCA CTTTTGTCCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46913328	NES10691310	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs30081928					SNP	C	C	C	C	C	C	A	C	C	C	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46913328	NES10691310	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115570967 () rs orientation: forward

Symbol	Name	Function Class
Rr583598	regulatory region 583598	1933 bp proximal