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rs30083346 SNP Detail
Summary
  • ID
    rs30083346
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr3:37740264 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          CACTG ATAAGCCCTC CTTATTTGGT
    R
    GTGATTGGTC TGAGATCAAT CTAAC                                      
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
A/J
AKR/J
BALB/cByJ
C3H/HeJ
CAST/EiJ
DBA/2J
KK/HlJ
LG/J
MOLF/EiJ
PWD/PhJ
SM/J
WSB/EiJ
ss46913426 NES10827217 PERLEGEN MM_PANEL2 f SNP G G A G G G A A A G
ss134811065 ENSMUSSNP5928120 ENSEMBL ENSEMBL_Sanger f SNP G G
ss320711758 CHEV_3_37585037 CHEVERUD SCREENING_POP f SNP G G
SNP Consensus Information
SNP Consensus Type
A/J
AKR/J
BALB/cByJ
C3H/HeJ
CAST/EiJ
DBA/2J
KK/HlJ
LG/J
MOLF/EiJ
PWD/PhJ
SM/J
WSB/EiJ
rs30083346 SNP G G A G G G A G A A G G
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss46913426 NES10827217 PERLEGEN MM_PANEL f SNP A/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:37740264 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm65174 predicted gene, 65174 917 bp downstream
Rr575540 regulatory region 575540 664 bp proximal
Rr575541 regulatory region 575541 1035 bp proximal
Rr575542 regulatory region 575542 1137 bp proximal
Rr575543 regulatory region 575543 1617 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory