rs30083585 SNP Detail

Summary

• ID
  rs30083585
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115571893 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCCTGAGT TTAGCAACAC
  ACACACTCAC ACATATGCAC ATAAACACAC ACATAAGCAC ACACACACAA GCAAGCACAT
  GTGCACACAC ATGCACACAC ATGCATACAC ACATGCACAC ACACACCATT GCACTTTTCA
  GTACCGTCTC TTTATGCACA TGAATAAGAC CTTTCAGGAT CTGCATCAAT AACAAGAAAA
  K
  CTAGGGCTGA GTGTGTTGGG ATAGACCTTG CCAGGTGACT GTGGAGCAGA ATCTAGAAGA
  AATGTAACAA CTATGATCCT GGCACTTGAG AGGCTGAAGC AGGAGGGTTA TAACTTGGAG
  ACCACTGGGA CTATATAGAA AGACTCTTTC AAAATTAAAT GGACAAAGGA AAAGTTATTG
  ACTTTATGGA TGATGAACCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45498382	mCV24999928	ABI	CRAMUS_MOUSE	f	SNP		T	G					G
ss46913346	NES10691164	PERLEGEN	MM_PANEL2	f	SNP	T		G	G	G	G	G		G	G	G		G	G	G	G		G
ss135665600	ENSMUSSNP3852592	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G
ss320893280	CHEV_3_115481162	CHEVERUD	SCREENING_POP	f	SNP												G					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30083585					SNP	T	T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46913346	NES10691164	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115571893 () rs orientation: forward

Symbol	Name	Function Class
Rr583598	regulatory region 583598	1007 bp proximal