rs30083615 SNP Detail

Summary

• ID
  rs30083615
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:72008544 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATATTGCTT TGAAGATTTC
  ATCACTGACT CATGATCAGC AAGATTAAAA CTAGTAACCA AATCTTAATC TGTTTTCATT
  TCTGTGTGAT CTCTAAGGCC CCAAGCACAT TTCAAGAGCT TGGGTGACTC ATTATGGTCA
  CTCTATGACC ACAATTTTAA CCTGTAACAT AAAAGAGCAC ATTTTAAACA TAGAACAAAA
  R
  TTAAGGTATT TTTATAAAAA TATAATTTTT CCCATCTCAA ATGTATATTT AAAAAATATA
  GGATGAGGGA CGAGAGAGAT GGCTCAGTGG TTAAAAGCAA TGGTTGATTT TGCAGAGGAT
  TCAGGGTGAA CTCCCAGCAC CCACACAGTG ACTCACAACC ATCTGTAACT TCAGTTCCCA
  GGGATCCAAT GTCCTTTTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46370770	mCV25308068	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss136619145	ENSMUSSNP2861572	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30083615					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:72008544 () rs orientation: forward

Symbol	Name	Function Class
Rr682693	regulatory region 682693	571 bp distal
Tcf12	transcription factor 12	within coordinates
Tssr90473	transcription start site region 90473	1882 bp upstream