rs30084151 SNP Detail

Summary

• ID
  rs30084151
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37741183 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACTCATGAC CCTCCTGCAT TTGACTCCTG GGTGCTGAAC
  TTGCAGATCA TCGCTACTTT GTGGTGTTGC TAAGGGTGGG GATGCTAACC AGACAAGGTC
  S
  TGTCTTTATC CTTTATTCTT TCAGTCTCGT ATTTGCTCAT CCTCGCTGGG ATTTCTTTCC
  TCCAAGTTGG CTTAAGAATC ACAATTAGAG ACAGGAGTG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss45401672	mCV22710276	ABI	CRAMUS_MOUSE	f	SNP	G	G				G		C
ss46913441	NES10827099	PERLEGEN	MM_PANEL2	f	SNP		G	C	G	G		G		G	G		G	G		G
ss134811092	ENSMUSSNP3864768	ENSEMBL	ENSEMBL_Sanger	f	SNP	G							C
ss320711763	CHEV_3_37585956	CHEVERUD	SCREENING_POP	f	SNP											C			C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs30084151					SNP	G	G	C	G	G	G	G	C	G	G	C	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46913441	NES10827099	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37741183 () rs orientation: forward

Symbol	Name	Function Class
Gm65174	predicted gene, 65174	within coordinates
Rr575540	regulatory region 575540	within coordinates
Rr575541	regulatory region 575541	116 bp proximal
Rr575542	regulatory region 575542	218 bp proximal
Rr575543	regulatory region 575543	698 bp proximal