CATTT CTAAAACTTG TGTCTGTCAA Y TTCTCTGTGA TCCTTTCCAG AAAGA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
DBA/2J |
FVB/NJ |
LG/J |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss45560951 | mCV23699205 | ABI | CRAMUS_MOUSE | f | SNP | T | C | C | C | ||||||||||
ss49598127 | NES12917438 | PERLEGEN | MM_PANEL2 | f | SNP | T | C | C | C | T | T | C | T | C | T | ||||
ss135173290 | ENSMUSSNP2553503 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | C | C | |||||||||||
ss320762683 | CHEV_3_51237701 | CHEVERUD | SCREENING_POP | f | SNP | C | T | ||||||||||||
SNP Consensus Information | |||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
DBA/2J |
FVB/NJ |
LG/J |
PWD/PhJ |
SM/J |
WSB/EiJ |
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rs30086161 | SNP | T | T | C | C | C | T | T | C | C | T | C | C | T | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss49598127 | NES12917438 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr3:51341200 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Naa15 | N(alpha)-acetyltransferase 15, NatA auxiliary subunit | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Rr576318 | regulatory region 576318 | 305 bp proximal | ||||||
Rr576319 | regulatory region 576319 | 732 bp proximal | ||||||
Rr576320 | regulatory region 576320 | 1205 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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