rs30086952 SNP Detail

Summary

• ID
  rs30086952
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70872248 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGATGTAG ATTAGAGAGG
  GAGGTGAAGA GGTTTCATTC TGAAACAGAT ACTTCAAGTC TACAAGCAGG GAGGGATGGG
  GCAAACTCTC CTGAAGGGTT TTTTCCTTTT GTGTATAACT CCTGTGTGGG TTTTTGTTTG
  TTTGCTTTGT TTTTGAGACG GGGTTTCTCT GTGTAGCCCT GGACGTCCTG GAACTCACTC
  K
  GTAGGACAGG CTGGTCTTGA ACTCAGAGAT CCACCTGCCT CTGCCTCCCA AGTATGGGAT
  TAAAGGTGTG TATCACCACA GCCGCTACAC CTATTTGTTC TCAGCCAACA ATGGAGCCCA
  GACCAAACCT GAAGTCTGTG TGAAGTCTGT GGCGGTGGTT GTAGGGTTTG ACTCCTGGAA
  CAAACAAGCT TGTGACAATT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46373594	mCV23565641	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T	T
ss136610238	ENSMUSSNP4096422	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30086952					SNP	G	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70872248 () rs orientation: forward

Symbol	Name	Function Class
Gm32074	predicted gene, 32074	1972 bp downstream
Rr682460	regulatory region 682460	1935 bp distal
Rr682461	regulatory region 682461	1120 bp distal
Rr682462	regulatory region 682462	96 bp proximal
Rr682463	regulatory region 682463	1226 bp proximal