rs30093933 SNP Detail

Summary

• ID
  rs30093933
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:82905776 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAA ACCCCCACAA CTTTTAATCT
  W
  GGTTACTCAG AAAAAAATTC CTTTC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46374025	mCV25061521	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	T
ss136700049	ENSMUSSNP5491893	ENSEMBL	ENSEMBL_Sanger	f	SNP	T			T
ss323044116	CHEV_9_82917330	CHEVERUD	SCREENING_POP	f	SNP					T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30093933					SNP	T	T	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:82905776 () rs orientation: forward

Symbol	Name	Function Class
Gm39383	predicted gene, 39383	within coordinates
Gm57057	predicted gene, 57057	within coordinates
Rr401561	regulatory region 401561	within coordinates
Rr683838	regulatory region 683838	99 bp proximal
Rr683839	regulatory region 683839	258 bp proximal
Tssr90739	transcription start site region 90739	264 bp downstream