rs30094178 SNP Detail

Summary

• ID
  rs30094178
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:54848677 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGTGAAAT GTGAGAGAAA
  TGGGGAATAG ATTGAAAATT TGGAAGATTA GGAAGTAATT CTGTATATAC TAATTCCTTA
  GATGGCTTGT ATGGCTATTT GCAGCCTATA AGGAACTTAC CTTTTTTGTA CTTGGCTTTT
  TGAGTTTGCT TTTAGGTCAC CTTGGGAATG AACATGTGCT TCGGAAGTCA TCTTTTCTCC
  Y
  CTTCTGTTCC AATTTTCCCA TTCCAGATTC AAGTCCATTT CACTTTGGTC ACATTTCCTT
  GAAGGAGATG CCAGGTGTGC ATTTCCAAAA TATTTCCAGG CATATGATTT TTAAATTATT
  AAAAAACTCT GTTTTTCAGT AGTCTTTTTG TTTGCTCTTT CAACCTATGA ACTACATTAC
  TGTGTGGCCC AAGCTGGCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47912458	NES11661248	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30094178					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47912458	NES11661248	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:54848677 () rs orientation: forward

Symbol	Name	Function Class
Znrf2	zinc and ring finger 2	within coordinates