rs30095128 SNP Detail

Summary

• ID
  rs30095128
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:54729933 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAATCAGG TCTTTGGGCT
  GGGCAGTGGT GGTGCATGCC TTTAATCCCA GCACTTGGGA AGCAGAGGCA GAGGCAGATG
  GATTTCTGAG TTTGAGGCCA GCCTGGTCTA CAGAGTGAGT ACCAGGACAG CCAGGGCTAC
  ACAGAGAACC CCCCCCCAAA AAAGAATCAG GTCTTTGGCA CCTTTAATAA ATGCTTGGGA
  Y
  CCTTGCCAGC TCTTAGGTTT GTACAGATTT TATTTCAGAT GCTGTCTGTG GCTTCTATTG
  TCTTCTCTCA CTGTGAGGCA CTTAAGAGGA GGTGGCAGGT GGTGTTAGTA CCCTCTCCCC
  ACTGACAGGG TAAGATAAAT GTTCCTTTTC CTTTCATCCC AAACAGATGT TTATAGCAAA
  CACAGTATAT GGCTTTTCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss47911768	NES11668015	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	T	C	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs30095128					SNP	C	C	C	C	T	C	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47911768	NES11668015	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:54729933 () rs orientation: forward

Symbol	Name	Function Class
Gm66973	predicted gene, 66973	within coordinates
Rr140760	regulatory region 140760	within coordinates
Tssr61090	transcription start site region 61090	1046 bp upstream