rs30095246 SNP Detail

Summary

• ID
  rs30095246
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:51187067 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGCAGAG AAACCAAGTA
  ATCCTAACCT TACCTCTCAC CAAATAAAAG CCTGTGTGCT AAGTACTTTC TTTACTTTCT
  TATATTCTGC CTACATCCCC ACACAGCAGA CATTACTGTT CCATTCACTG AGTGCTGCAG
  GAGCTCAGGC TCCTCGCTTA AATAACTACA AAAGGGTCAG AATTTGAACC CAGATACCAA
  R
  TATTCTTAAC CTCACGCCAG GAACAAGAGT AACATCCTAC TTCTGTCATA AAATTTTCTC
  ATTACAGTTT CTTTTTTATA GCTCCTCCTC AAGGATATGT AGCTTAATCC TGCTCTCCCT
  GGACAAACAG AATAAAGCTG AAGTGGCTGG GACAGGACCC TAGAAGGAGG ACACTGTCAG
  CTCCAAGTCT GCAAAGCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49598793	NES12914393	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30095246					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49598793	NES12914393	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:51187067 () rs orientation: forward

Symbol	Name	Function Class
4930577N17Rik	RIKEN cDNA 4930577N17 gene	1263 bp downstream
Cpgi13132	CpG island 13132	1845 bp distal
Elf2	E74-like factor 2	within coordinates
Rr576261	regulatory region 576261	1581 bp distal