rs30101955 SNP Detail

Summary

• ID
  rs30101955
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:39253246 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTATGCACT GGGAGGAAGG
  CAGGAATAAT ATGCACCGAG AGTGTCTATA TCCACATCAC ATGCCTACTT CCTTATTGCC
  CTCAACCTAC AGCTCTTGGA GTCCTCCAGA GTCTCAATTC CAAGGTAAGT TATACAAAAG
  AAAGAGTGAA AAGGTGTGTT TGTGAAAATA AAAACAGATT TGTAGGCAGC TAGACTATCC
  R
  TTCATGCTTT TTAGTATCTT CCTTTTCACA TTTTTAAAAA AAAAAAAACA GAATATTCTA
  ACTTTTATAG ATCAAGCTAG TTAGATCAGT GGTTACATTT AAAAATTTAT CTAAACTTAA
  GTTGTTTGGA TTCCTCTCTT TCTTGTCGTT TCTCTCACTT CCTTCATCTC ACTCCCTGAG
  AATGCTTTTT ATCTCTCCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss49101723	NES12439490	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs30101955					SNP	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49101723	NES12439490	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:39253246 () rs orientation: forward

Symbol	Name	Function Class
Gm60523	predicted gene, 60523	within coordinates
Rr388296	regulatory region 388296	43 bp upstream