rs30102710 SNP Detail

Summary

• ID
  rs30102710
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:59249463 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATTTCACC CTGGTTTGAA
  CGTGTGCCTC CTGTCTGTGG TTTAGTTAGC ATACAAATTA ATGCATTTCA TCCTGGCACC
  TATGTTACTA TGCTTCGTTC TTATTAACTC CTCTCATTGC TTTCTCTCCT ACCCACCCCA
  GCTAGCTTGT TTTTGCTTTA CATGCATGCC TTTATACACA CTCACAGATT AGAATAGTGT
  R
  TAACTAAATA AAATTCTAAA CACACATGCG CACGTACAAG TGTAAATCTA GCTTCTGTTT
  GTCAGAGAAG CTACACGGTG TTTCCTTTTT GAGTCTGTCT TGTTTTGATT AGCCCAATTG
  ATTTCCAGTT GCATCCATTT CCTGCATATG TCATGATTTC ACTCTTTTAT GGCCACATGG
  GACTCTGTTG TACACATTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49600536	NES12904265	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30102710					SNP	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49600536	NES12904265	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:59249463 () rs orientation: forward

Symbol	Name	Function Class
Igsf10	immunoglobulin superfamily, member 10	Intron
Rr577347	regulatory region 577347	100 bp distal
Rr577348	regulatory region 577348	989 bp proximal
Tssr33412	transcription start site region 33412	1939 bp downstream
Tssr33413	transcription start site region 33413	1971 bp downstream