rs30103833 SNP Detail

Summary

• ID
  rs30103833
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:102980772 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AATTTTGTGT GATATTGAGC CGGAGTTTCC TGTACCCCAG GCTAGTCTTA ACTTGCTACA
  TAGTTGAAGG TGACCATGAA TTCACAATCT TCCTGCTTCT ACTCCCTGAG TGCAGGCATT
  CTCCATCCCG CCTAATTTTC AAGAGTGTTT TATTGGATAT TGTCTGTCAG AATTTAAGTA
  GGAGCTTTAT CTTTCTTGCT TACTATATGC TACTGCCCAG GCCAGTCACA GCTTTCAAAC
  AATGAGATCA CACAACTGGT AAAAGTGTGT GTGTGTGTCT GTGTGTGTGT GTGTGTGTGT
  S
  TGTGTGTCTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTT GAGTATATGT AGTGTGTATG
  AGTGTGTGTG TGTGTGTAAA AGAGTTGTGT GTGGCTGTGC ATGGGAGTGT GTGAGTGTGG
  TGTGTGTGAT AGAGCATTTG GGTGTATAAG TGTGAGTGTT AAGTGTGTGA GAGTATGTTT
  GGGTAAGAGT GTGAGCAAAA GACTTATGAA CGTACGATGA CATTCACCAA CTGCAGAAAG
  CCCTCCTGGT GTTAGGATGC TCCTTTTCAG AAGCCCCTGA CACTGTGCTG TAAGTGGAGT
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45395214	mCV25365124	ABI	CRAMUS_MOUSE	f	SNP	C	G	G
ss135559886	ENSMUSSNP4633013	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs30103833					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:102980772 () rs orientation: forward

Symbol	Name	Function Class
Ampd1	adenosine monophosphate deaminase 1	558 bp upstream
Gm43062	predicted gene 43062	964 bp downstream
Tssr30962	transcription start site region 30962	553 bp upstream
Tssr30963	transcription start site region 30963	579 bp upstream