rs30104601 SNP Detail

Summary

• ID
  rs30104601
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51492086 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTGGTCCAT TGAGAGCAGG AAGAACCACC ACTACCCAGT
  GGGGAGGAGA GACCAAGTAT TGCATCTGGG AGCCCAGAAA GGAACAGCAA AATGGAAACT
  K
  GGGATCCAGA CTGAAAGTCA GACATATGGA ACTGAGGATG TCACCCCTCT GTTTCATTCT
  GCATCTGACA CTGCAGGAAG GCTCACAGCC ACATCTGGT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39152137	mCV25395169	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss139477917	ENSMUSSNP4149333	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss324622190	CHEV_14_51874304	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30104601					SNP	T	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51492086 () rs orientation: forward

Symbol	Name	Function Class
Gm62421	predicted gene, 62421	within coordinates
Rnase2a	ribonuclease, RNase A family, 2A (liver, eosinophil-derived neurotoxin)	633 bp downstream
Tssr125425	transcription start site region 125425	744 bp downstream
Tssr128435	transcription start site region 128435	1117 bp downstream
Tssr128436	transcription start site region 128436	1494 bp downstream