rs30106514 SNP Detail

Summary

• ID
  rs30106514
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:137669572 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCCACACA GCACGGATCA
  CAGTGGCATC TGTCAGTTGA CACTGCTCCC TCCCTGATTG ACAGCTAGGG GAACAGGGAC
  CCTGGTGCTA CCACAGCAGG GAAATGAAAG ACAAGCAAAC TAGGTAAGGA AAGGAGGAAG
  TGATGCAGGG GTTCTGCGTT TCTGTCAAGA GCCCCAGCTG CTGCTGAAAA CATCTTTAAG
  Y
  CAGGCTGGCA GAATTTGAAT AGAGGCCCGG ATTTTAATGT ATGCAGGAAC AGTGGCACGG
  TCAATTTGTG TTGTTTTAAG CCATGACAAA TTTTTGGTGA CTTGTTATAT AGCATAGAAA
  GTGAATACCG AAGGGTCCAT GTCTAAGAAG AGGATAAACA ATATGTTAAA CTCTTTGCTT
  TTGAGCTCAC TGAAGCCTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45394273	mCV27576167	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	T
ss135945665	ENSMUSSNP4162298	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		T
ss320977310	CHEV_3_137626775	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30106514					SNP	T	T	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137669572 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dapp1	dual adaptor for phosphotyrosine and 3-phosphoinositides 1			Intron
				Noncoding-Transcript-Variant
Rr586037	regulatory region 586037			1482 bp distal
Rr586038	regulatory region 586038			within coordinates