rs30108837 SNP Detail

Summary

• ID
  rs30108837
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:33899639 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGCA TTACCTGGTC AAATGGGCAA
  Y
  GAACGGCTGG CTATTAAGGA GACTA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45395470	mCV24614429	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	T
ss134758235	ENSMUSSNP11502	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30108837					SNP	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:33899639 () rs orientation: forward

Symbol	Name	Function Class
Ccdc39	coiled-coil domain containing 39	1180 bp upstream
Rr575077	regulatory region 575077	810 bp distal
Tssr32964	transcription start site region 32964	1242 bp upstream
Tssr32965	transcription start site region 32965	1177 bp upstream