rs30110393 SNP Detail

Summary

• ID
  rs30110393
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153563480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAATATGAA ATTAAAATTT
  AAATGCATAT TTAATTTATA TTTTGGTATT ATTTTATCTT GTTTCATAGA AATAGGAACT
  CAAGGTCTCA TACACACTTT AAAGCATGCT ATCCTGGAGA ATTAAATTTC TCATGAACAT
  TTACTACTTT ATGAAAGTCT CATATCCTTG CAAATGACAT TTAAAGAAGA AATCCTGTTA
  M
  TCAGTCAAAT TTATAAACAA AATACCAAAA AGTAACAGAA AACTCAGCAG AGAGATGAGT
  CTGCAAACAT ATTTGTTTTA AAGGCAGGGA CTAACACTGT TCACTGCTAT GCAGTGACAC
  AGTTGTAAAT GTCACCCAGG GATAAGATGA GACATCAGAA AGCCACCTGC CGAAGAATAC
  AACAACCATT GTAGCCTAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45395378	mCV23503686	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	C
ss136114485	ENSMUSSNP5020206	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30110393					SNP	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153563480 () rs orientation: forward

Symbol	Name	Function Class
Msh4	mutS homolog 4	within coordinates