rs30113046 SNP Detail

Summary

• ID
  rs30113046
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70347965 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAACAACAA AAACCCACAT
  AAACATACAC CAAAAAAAAA AAAAAGATTG TATAGTTCAT GTTCACGTGT GTGTTTTTTG
  ACAGTGCTAG GACAACCTCA GCTGCTGTCC CCAGGAGCTA TGTACCTTGT GTGCCTTGCT
  TTTAAGGTAG GATCTCACCA GCCTGGGACT CCAAGTAGGC TAAGCTGGGA GACTAGCAAG
  Y
  CATGGGGATC TGCCTGTCTC CAGCTCTGGG ATCATAAATT ATAAGTATGT GCCAGCACAC
  CTAGCTTTAT AAAAAAGATC AAGTTTAATT CCTGTTGAAG CAACTCTGTA GCTACACACT
  TTAAATAAAT TCTAAGTGGA TACAAGATAT AAGAATAAAA AAACAAAACA AAACAAAAAC
  AAACACTAAA ATCCATATGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39152653	mCV24339236	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss139680842	ENSMUSSNP6429998	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30113046					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70347965 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Bin3	bridging integrator 3			Intron
				Noncoding-Transcript-Variant
Rr494843	regulatory region 494843			813 bp distal
Rr494844	regulatory region 494844			455 bp proximal
Rr494845	regulatory region 494845			549 bp proximal