rs30115746 SNP Detail

Summary

• ID
  rs30115746
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115437416 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATACG CTCTTAACCC CTGAGTCACC
  Y
  CTCCAGACCC TAAAATCTGT GTATT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45396878	mCV24998121	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	C
ss135663644	ENSMUSSNP5447224	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
ss320892537	CHEV_3_115346685	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30115746					SNP	T	T	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115437416 () rs orientation: forward

Symbol	Name	Function Class
Rr65100	regulatory region 65100	985 bp proximal
Rr367536	regulatory region 367536	1329 bp downstream
Rr367537	regulatory region 367537	761 bp downstream
Rr397953	regulatory region 397953	725 bp upstream