rs30117267 SNP Detail

Summary

• ID
  rs30117267
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127655157 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGCCTGTG TCACAGACCT
  GAGTGTCAGC AATATGGTAC GGGAGGGGGA AAAATGCAGT TTCCATTGCA GAAGCAATTT
  TGACCAAACG GCCAGGCACC AAGCTCCTGA GAAATGTCTC TTAGAGCTTG AAAATGAAAT
  GCCTGGGGAG CACTGTACCG GGCCAAGCCC AGCTCTATCT GAACATCTCA TAAATGTCCC
  K
  ACAAGCATAG CCTGACAGCG AAGAAAATGT AGGAGAACCA GTTCTGAAAT GCAGTGAGAC
  GGAATAAAGG AAAGCTCAGG CTCAGCTGCT CACGGAAGTT CACATGCACA AGCATCCTAA
  GCAAGGAGCG ACTGTTCGGG CATATGTATG TACTGTTCGG GCGTATGTAG AAATGTGTGT
  GTGCAGAAAG GAAGTAGGAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45397067	mCV24302381	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss135873383	ENSMUSSNP943236	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss320957594	CHEV_3_127564426	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30117267					SNP	T	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127655157 () rs orientation: forward

Symbol	Name	Function Class
Gm35585	predicted gene, 35585	within coordinates
Gm43652	predicted gene 43652	1676 bp downstream
Rr584887	regulatory region 584887	within coordinates
Rr584888	regulatory region 584888	1005 bp proximal
Tssr31614	transcription start site region 31614	77 bp upstream