rs30118132 SNP Detail

Summary

• ID
  rs30118132
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:125395285 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGTG AGCCGGGCGT TGGTGGCACA
  Y
  GCCTTTAATC CCAGCACTTG GGAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45896806	mCV24919577	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss133615400	ENSMUSSNP3494490	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30118132					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:125395285 () rs orientation: forward

Symbol	Name	Function Class
D6Jpk2	DNA segment, Chr 6, Japan, Kominami 2	190 bp distal
Gm66368	predicted gene, 66368	within coordinates
Gm66372	predicted gene, 66372	1307 bp downstream
Rr638702	regulatory region 638702	413 bp distal
Rr638703	regulatory region 638703	322 bp proximal
Rr638704	regulatory region 638704	587 bp proximal
Rr638705	regulatory region 638705	1037 bp proximal