rs30122560 SNP Detail

Summary

• ID
  rs30122560
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:127766731 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGCA GTCCGAAGGG GAAACCAGTG
  R
  GACAAGTGAC CACATAAGAG GAGTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45896753	mCV23215017	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss133633249	ENSMUSSNP2984527	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss321942298	CHEV_6_127739786	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs30122560					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:127766731 () rs orientation: forward

Symbol	Name	Function Class
Gm40402	predicted gene, 40402	within coordinates
Gm66979	predicted gene, 66979	584 bp upstream
Mir7233	microRNA 7233	1625 bp upstream
Rr151534	regulatory region 151534	within coordinates
Tssr59045	transcription start site region 59045	582 bp upstream