rs30123591 SNP Detail

Summary

• ID
  rs30123591
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37928271 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGGCCTCCC AGAGAGCCTC GTCAGGGACG CTGCTTCCAG
  TTCTGTGGGT TGTGGAGACA CAGCAATTCT TTCTGTGCTT CTATACTCCC AGGCATCTCC
  K
  TTAGCTCATG AGGGGCCCCA TGTCATCTGT ACAATTCTCT GTAGGAAATT CTTTCTCCTT
  TCGAATGGTT TCTCCTGTCA TATATGTGTG TGTGTGTGTT                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss46916051	NES10815592	PERLEGEN	MM_PANEL2	f	SNP	T	G	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs30123591					SNP	T	G	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46916051	NES10815592	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37928271 () rs orientation: forward

Symbol	Name	Function Class
Rr575579	regulatory region 575579	592 bp proximal
Rr575580	regulatory region 575580	1800 bp proximal