rs30123632 SNP Detail

Summary

• ID
  rs30123632
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:80157719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACATTGAGCC AGGATTAAAA GATAAATTTT AAAAGATAAA
  GGGCATAATC GTGTCCCTGG GCAACTTAGA ATGTGATGGG AAATGCACGC ACTGTCTGAA
  W
  GTTACGCTGA ATAGTAAGAA ACTGTTCATG CCCCACCCCA AATACAGTGA TGACTGGGGA
  TTTGAAAATC CTAGTGGAAG AACTGATTAC TTGAAAGAA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46374523	mCV22773837	ABI	CRAMUS_MOUSE	f	SNP	T	A	T	A
ss136684215	ENSMUSSNP1799606	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		A
ss323021786	CHEV_9_80098244	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30123632					SNP	T	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:80157719 () rs orientation: forward

Symbol	Name	Function Class
Myo6	myosin VI	within coordinates
Rr201868	regulatory region 201868	1682 bp proximal