rs30124736 SNP Detail

Summary

• ID
  rs30124736
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70638390 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAGTCGGC CATCAGTGGA
  AAGAGAGGCC CATTGGACTT GCAAACTTTT ATCTGCCTCA GTATAGGGGA ACACCAGGGC
  CAAGAAGTGG GAGGAGGAGG GGAGTGTAGG GGGTAGAATA TGGGGGGCTT TTGGGATAGC
  ACTGGAAATG TAAATGAAGA AAATACCTAA TTTAAAAAAA AAGAATAGAA GGATAATAAA
  Y
  AGCATATCCA TCTCTGAAAA AAAAAAAGGA AAAAAGGAAT GAGAAGTTCA AAAGTAGAGT
  TGTAGACTAG AGTAAAGATC TAAGAATACT AGAGGGATCA TCTGCATGAA TGTTGTAGTT
  TCAAAGAATT ATGATGGTTG ATGTGAGAGT GAGTCAAGAT CTAAAAATAA ATAATGGGAA
  GTGACTTTGA ATTCCTGTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46375387	mCV22852496	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss136608726	ENSMUSSNP7136265	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30124736					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70638390 () rs orientation: forward

Symbol	Name	Function Class
Adam10	a disintegrin and metallopeptidase domain 10	within coordinates
Rr201557	regulatory region 201557	1190 bp distal
Rr201558	regulatory region 201558	590 bp distal
Rr201559	regulatory region 201559	11 bp proximal
Rr210505	regulatory region 210505	411 bp proximal
Rr210506	regulatory region 210506	1743 bp proximal
Tssr85932	transcription start site region 85932	1196 bp downstream