rs30125336 SNP Detail

Summary

• ID
  rs30125336
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50671032 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGAGATAAC CTGCCTGTGC TTCTGCCTCC GGAAAGCTGG
  GATTAAAGGC GTGCACTAGC ACACACAGCT GAGATTTTAA ATATATTTTT ATATTTTGTG
  W
  ATGAGTGTTT ACCTGAATAT AAGTCTTCCA TGATCCACAT GTATGCAGTG ACTGTGGAGG
  CTAGAAAAGG GCACCAGATC CTTTGGGACT GAAGTTACA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46374537	mCV25205675	ABI	CRAMUS_MOUSE	f	SNP		A	T
ss136480999	ENSMUSSNP4044578	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
ss322959942	CHEV_9_50567837	CHEVERUD	SCREENING_POP	f	SNP				A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30125336					SNP	T	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50671032 () rs orientation: forward

Symbol	Name	Function Class
Cfap68	cilia and flagella associated protein 68	1642 bp downstream
Gm67659	predicted gene, 67659	within coordinates