rs30125576 SNP Detail

Summary

• ID
  rs30125576
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:103057474 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATAC AAGATAGAAG GTAGGGAGAA
  W
  AATCAAACTG AAAATATATA CCGTG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	DBA/2J
ss46375398	mCV23016701	ABI	CRAMUS_MOUSE	f	SNP	T	T	A
ss136876271	ENSMUSSNP5703826	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	DBA/2J
rs30125576					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103057474 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22231	CpG island 22231	813 bp proximal
Rab6b	RAB6B, member RAS oncogene family	within coordinates
Tssr86769	transcription start site region 86769	1113 bp upstream
Tssr86770	transcription start site region 86770	1176 bp upstream