rs30127533 SNP Detail

Summary

• ID
  rs30127533
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:61926701 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TACAG CGTGTTTGTC ATAACTCTTT
  K
  GGGCAGAATT CAAAGCAACT TAAAC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss39650781	mCV24037004	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T
ss147260912	ENSMUSSNP6963935	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30127533					SNP	G	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:61926701 () rs orientation: forward

Symbol	Name	Function Class
Gm35919	predicted gene, 35919	1223 bp downstream
Rr346544	regulatory region 346544	501 bp distal
Rr346545	regulatory region 346545	within coordinates
Rr351728	regulatory region 351728	556 bp distal
Rr354902	regulatory region 354902	1301 bp distal
Rr356351	regulatory region 356351	64 bp proximal