rs30127562 SNP Detail

Summary

• ID
  rs30127562
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:67009931 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTTATTAAT GTTTTCCTAG TGTCTAATTT TATAGCATCT
  AATCTGAAAA CTAGCAAGCA ATGTGTGTGT GCGCGTGTGT GCTCTTTTAG GTATGAAGGC
  Y
  TCCATTAGGA AAGAGCCTCC CTCAGGCCTC CTTCCCCAGC ACAGGCCCCA CATAGTGACA
  GGGCCACGGA AAGGAGACAG AGTGCCAAGC GGAGCTGCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46375624	mCV24194473	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss136577270	ENSMUSSNP3282050	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
ss322989551	CHEV_9_66950456	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30127562					SNP	C	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:67009931 () rs orientation: forward

Symbol	Name	Function Class
Gm10646	predicted gene 10646	within coordinates
Gm22145	predicted gene, 22145	1559 bp upstream