rs30129108 SNP Detail

Summary

• ID
  rs30129108
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37914684 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTCTGTGTC TCAGGGTTGT TTATATAGGT GAGGAATTTC
  AGTGAGAGGC AACCCAGTCA TGCCCTGTCT TGGTTCAAAC ACACCTGTCA CTCTAGCTGA
  M
  AACACCGCAC GCCAATTGCA ATGTTCTCGC TCCTGATCAG TGTCTGCTTA TGCCTCATCT
  CCGGAGAGCC GACACTGGCT GTGTTCTTTG AAAGGCACAG                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss46915910	NES10816191	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs30129108					SNP	A	A	A	A	A	A	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46915910	NES10816191	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37914684 () rs orientation: forward

Symbol	Name	Function Class
Rr575577	regulatory region 575577	within coordinates