rs30129250 SNP Detail

Summary

• ID
  rs30129250
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:62988668 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GCCTTGGCGG AAGCTTCCGT TCACAGCACT CACATGGCAG CTCACAACCA TCTGTAACTC
  TAGTAGAAGG GGATCCAACA CCCACTTCTG GCACAAACAC ATAGCACAAA CATACATGTA
  GACAGAACAC TTGTACACCT AAAATCTTGA AAAATAAAAA TGCACTTAGA TACTACTTTA
  AAAAGAAAAC ACTGCTCGTG TAGAAGTTCA GTTTGAAGCA CCTACATCTG TCACCTCACA
  ACTTCCTGTA ACTTCAACAC CAAGAGTATT GGATGGGTTC TTCTGGTTTC TCAGTTCACC
  Y
  ACACTCAAGC ACACACACAC ACACACACAC ACACACACAC ACACACACAC ACACACACAC
  ACTTACACCT AATTTAATAA AACAAATCTT AAAGCAGGGT GTAGTGGTAC ATGCTTTAAT
  TCTGGGTACT CAAGAGACAG ACACAGGTGT CTCTGTAAGT TCAAGGCCAG CCTGGTCTGT
  GTAGCCAGTT CCAGACCATA CTGCTTCAAT CAATTAATCA GTCAATCAAT TAATCAATGA
  CATGAAAAAT AAAAAGACCC CAATAAAGAC CCCCAACGCA AGTGCATGAT TTAATGGAGT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46375801	mCV25256325	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30129250					SNP	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:62988668 () rs orientation: forward

Symbol	Name	Function Class
Gm48193	predicted gene, 48193	within coordinates
Rr680921	regulatory region 680921	800 bp distal
Rr680922	regulatory region 680922	1813 bp proximal