rs30134867 SNP Detail

Summary

• ID
  rs30134867
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45313578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTACT CATGCTCTGC TGGTATTCCC
  R
  CTAGGATGAT CTTGAGAGCC TGGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46376353	mCV25163657	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss136411189	ENSMUSSNP3938423	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss322943292	CHEV_9_45210363	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30134867					SNP	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45313578 () rs orientation: forward

Symbol	Name	Function Class
Fxyd2	FXYD domain-containing ion transport regulator 2	within coordinates
Gm68814	predicted gene, 68814	within coordinates
Rr195106	regulatory region 195106	178 bp distal
Rr200381	regulatory region 200381	378 bp distal
Tssr84783	transcription start site region 84783	285 bp upstream
Tssr84784	transcription start site region 84784	335 bp upstream
Tssr84785	transcription start site region 84785	862 bp upstream
Tssr84786	transcription start site region 84786	894 bp upstream
Tssr84787	transcription start site region 84787	916 bp upstream
Tssr84788	transcription start site region 84788	947 bp upstream
Tssr84789	transcription start site region 84789	973 bp upstream