rs30135184 SNP Detail

Summary

• ID
  rs30135184
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:60987753 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACTTTGGA GAAAGTTCTA
  GCATTACAAC AATCACTAGC CTTGCTGGAC TCCTTCTTTG AGGCTCAAGG TGGACCTCTT
  CCCTGCCCGA CTTTCTCAGA GCTCATGTAT TGGACGCGTC CCTCTTCTCT CTTTTCTCAG
  AACATCTCCA GCCATTTATC AGCACATGAC ACAGCAGACC CTCTCTCCCC TAATGAGCCC
  Y
  GTACTTTCCA CTTAGATCAA TATCTGCTAT GTGCTTGCTA AATAATGGGC AGCTTGAAGA
  CCCACCACCC AAGTTTCACT CCCTGTAAAG CTTTATGTGA CCAATTCATT ACGACAAGCT
  CTGTGTTCCA GGGCTGGAGT TTGCAGACCC AAGATCCCTA TCCTGGTTCC ATTTCTGTTG
  CTGCGACAAA AGTGTCTTCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46377235	mCV24173624	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss136537160	ENSMUSSNP2543915	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
ss322978167	CHEV_9_60928278	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30135184					SNP	C	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:60987753 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21877	CpG island 21877	1256 bp proximal
Gm34004	predicted gene, 34004	1409 bp upstream
Rr209953	regulatory region 209953	649 bp proximal