rs30138225 SNP Detail

Summary

• ID
  rs30138225
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75191613 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCGTG CATTTCAGAA GAAGACTCAC
  R
  TGCGTGTAAC CCACCAATGG GGAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46376479	mCV25135549	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss136640058	ENSMUSSNP6407657	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
ss323007793	CHEV_9_75132138	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30138225					SNP	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75191613 () rs orientation: forward

Symbol	Name	Function Class
Myo5c	myosin VC	within coordinates
Rr197405	regulatory region 197405	1013 bp distal
Rr197406	regulatory region 197406	988 bp proximal
Rr204947	regulatory region 204947	1105 bp proximal
Rr212262	regulatory region 212262	1745 bp distal
Rr212263	regulatory region 212263	985 bp distal