rs30141816 SNP Detail

Summary

• ID
  rs30141816
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70582706 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGGCAAAC CCCAGGCTCT
  GTTTACATGC AGTTTACAGC CTAATCCCAG ACACAAGAGG GTCATAAGAA GTAACCAAGG
  AAGTGAAGGA TAAGAAACAA AACCAAGGGC TGGAGAGATG ACTCAGCGAT TTAGAGCACT
  GACTGCTCTT CCAGAGGTCC TGAGTTCAAT TCCCAGCAAC CACATGGTGA CTCACAAATA
  Y
  CTATAATGAG ATCTGACGCC CTCTTCTAGT GTGTCTGAAG ACAGCGACAG TGTACTCATA
  TAAATAAAAT AAATAAATCT TTAAAAAAAA AAGAAAGAAA GGAAAAAAAA AGAGAGAAAC
  AAACCCAAAA GATCAAATTC TAGGACGGAT CATATTTAAG AGGTAAAGAG AAGAAAGCCT
  TAGGGAAGTC AAAGAGAGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J
ss46378540	mCV23565000	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J
rs30141816					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70582706 () rs orientation: forward

Symbol	Name	Function Class
Rr197050	regulatory region 197050	495 bp proximal
Rr201554	regulatory region 201554	within coordinates