rs30142675 SNP Detail

Summary

• ID
  rs30142675
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:14934041 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGCCAGGG GTGTTTCTTC
  TTCTTCCTGG GTGTGTGTGT TTTTTTTTTT AAATCCTCCC ACTGGTGACA TTCCATGCTG
  ATATTTTCTG TTGTGGGGTG ACTTGGCACT ATAGGACCTC TGGTACCTTC CCACCTCCAG
  GGACCAGAAC CTCCTCACCA CCCTACCTCC CAAGAAAAGC GCCTAGATAT GGACACATGG
  K
  CCCACAAGAC TAAGTCACCC AGATGAGCGC TGTATGGGTG CCATGTCACT GTCAGGGTAC
  TTGTAGCTGA CTGCTAGGGC CATATCTTTG ACCCACCAAG ATTTAAGATG ATTATAACCA
  TTAATTTCCT ACTTCCCAAT GAGCCCTGCC CGTACCATGT AGCCCACATA CAGAGGGCAA
  AGCATTTGGG GGTCATGATA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss47418518	NES11500075	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	G	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs30142675					SNP	T	T	T	T	G	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47418518	NES11500075	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:14934041 () rs orientation: forward

Symbol	Name	Function Class
Cln8	CLN8 transmembrane ER and ERGIC protein	Intron