rs30143717 SNP Detail

Summary

• ID
  rs30143717
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55294290 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAG TTTCTGATTC ACTTGGTGTA
  K
  AGTGTGGTTC AGAAACGTAT ATTTA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39155063	mCV25265950	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T
ss139576745	ENSMUSSNP6426161	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss324641946	CHEV_14_55675670	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30143717					SNP	T	T	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55294290 () rs orientation: forward

Symbol	Name	Function Class
Rr492411	regulatory region 492411	1330 bp distal
Rr492412	regulatory region 492412	1426 bp distal
Rr492413	regulatory region 492413	700 bp distal
Tssr125746	transcription start site region 125746	1958 bp downstream
Tssr125747	transcription start site region 125747	1155 bp downstream
Tssr125748	transcription start site region 125748	958 bp downstream