rs30144418 SNP Detail

Summary

• ID
  rs30144418
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45237071 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTT CACAAGGCAC CCTGCTCTAA
  Y
  CCCCCGTGCA TCTTGCCTGA ACCTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46378473	mCV24048465	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss136409327	ENSMUSSNP1229373	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss322943025	CHEV_9_45133856	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30144418					SNP	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45237071 () rs orientation: forward

Symbol	Name	Function Class
Rr203899	regulatory region 203899	892 bp distal
Rr203900	regulatory region 203900	within coordinates
Rr203901	regulatory region 203901	650 bp proximal
Tmprss13	transmembrane protease, serine 13	within coordinates