rs30144814 SNP Detail

Summary

• ID
  rs30144814
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:14463833 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATTG ACTTTCTCTT TCTTGAGCTC
  Y
  TATAACTGGT AGGCCATGAG CTCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	NZW/LacJ	WSB/EiJ
ss39154691	mCV23786415	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss62079959	NES17153419	PERLEGEN	MM_PANEL2	f	SNP		C	C	C	C	T	C	T	C
ss138985330	ENSMUSSNP6523492	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	NZW/LacJ	WSB/EiJ
rs30144814					SNP	T	C	C	C	C	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62079959	NES17153419	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:14463833 () rs orientation: forward

Symbol	Name	Function Class
Abhd6	abhydrolase domain containing 6	within coordinates
Gm30244	predicted gene, 30244	1886 bp upstream
Rr296822	regulatory region 296822	1367 bp proximal
Tssr124225	transcription start site region 124225	592 bp upstream
Tssr124226	transcription start site region 124226	650 bp upstream
Tssr127395	transcription start site region 127395	1895 bp upstream
Tssr127396	transcription start site region 127396	1883 bp upstream