rs30149931 SNP Detail

Summary

• ID
  rs30149931
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:43812393 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGAACTCTT GGCTCCTCCA
  GCACCATATT TGCCTGCATG CTGCCATGGT TCCCACCATG ATGATAATGG ACTAAACCTC
  TGAAACTGTC ACCCAGCCCT AATTAAATGT ATGCCTTTAT AAAAGTTCAT TGGTCATGGT
  GTCTGTTCAC AGCAATAAAA CCCTAAGATA ACCCCCCCCC CGTGCCTGTT GATTAAAAGA
  Y
  GAGAAAACAG GTTCCTCCAC CTGATGGTGA CGTCAAAGAA AACTATATTG TAGAGAGTGT
  TTGTCAACAT TGTGGAGAAT TGCTGTGAAG AATTTTCAGG ATAAGGGTTG GGGTAAATAC
  AATTAGGCAA AGTGATTTAT CTACTATGGA GTCCTTTAGA CTTTGGCATA GAAGAGTTAC
  ATAATGGAAA TCTAGGAAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49106927	NES12453397	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30149931					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49106927	NES12453397	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:43812393 () rs orientation: forward

Symbol	Name	Function Class
Rnf182	ring finger protein 182	within coordinates
Rr388339	regulatory region 388339	1474 bp upstream