rs30151375 SNP Detail

Summary

• ID
  rs30151375
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:5348384 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTTTTGTT TTGTTTTGTT
  CTTAACTAGG GGAGTTGGGT AAGGTTTCAA AATGAAAGCT AGATATATAC ATGTCAGTGG
  ATTTTTTTTT TTAATTCATG ATTGCAACTT TGATGCATAA CCAAAAAACT CTAGTTTCAC
  AGTGGCTCAC AAGAGCAAAC ATTCTTTTTT TTTTTTTCTA ACAGTATATA AGAGCTGATG
  Y
  TCCATAGGTC TCCCATTCTT CTGTAGGTTT GTGAGGTGTG CTAAACATGC AAGAGCTTGT
  TTTTGATGGT GTGCTAAACA TGCAGTTTTT GATGGAAGAG GTTATCTCCA CCTCTGGGTC
  GAAGAACAGC CTTGCTTGCA ATTTGCTGTG AAATACAGTT ATTCAAAGTC CATTGTCCTG
  CTGTAGGCCA CTGTTTGTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39651681	mCV25013664	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss325518182	CHEV_18_5348382	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30151375					SNP	C	T	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:5348384 () rs orientation: forward

Symbol	Name	Function Class
Gm50064	predicted gene, 50064	within coordinates
Gm52372	predicted gene, 52372	630 bp upstream
Gm58537	predicted gene, 58537	within coordinates
Rr370337	regulatory region 370337	1059 bp downstream