TGGAG GTCAGGGGTC AGTGTCATGT R GTTTCCTTAG TCATCTCTTC TTTTT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|
ss45400122 | mCV24283800 | ABI | CRAMUS_MOUSE | f | SNP | A | G | G | ||
ss134749376 | ENSMUSSNP1806728 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | G | G | ||
ss320698095 | CHEV_3_32306335 | CHEVERUD | SCREENING_POP | f | SNP | G | G | |||
SNP Consensus Information | ||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs30153895 | SNP | A | G | G | G | G |
Location: Chr3:32461562 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Pik3ca | phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha | within coordinates | ||||||
Rr574958 | regulatory region 574958 | 1278 bp proximal | ||||||
Tssr32930 | transcription start site region 32930 | 1564 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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