rs30156034 SNP Detail

Summary

• ID
  rs30156034
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:15009470 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTTGTAGC CAAGAGCCAG
  GCACTGGCTG CCTCTCTCTA GTGCAGTGAA TCTTCCTCCA GTACAAGGCT TGGGTTCTGC
  TGGAAGTCCA TGCGGGAGCT GTCTGAGCTG CATCTTCTCA TGCACTGTGT CTTCCGCATC
  AGCACCCGCA TCTGCATCCT CAACCTTCCT GTCAAGTTAC AGAGGAGTTC TGTGCTTGAG
  Y
  CTCACAATCC AGCCTTTGCC AGCTTCAGGC TTTTCTAGTC CTGCCTTCAC GGGATTGGGA
  TTGAAGACAG TTGGCGTCTC TTCACTTGGC TGACTTGAGG AAATGCTGTA GCCGGCCCAT
  TTGATCCCCT GCATCCTCCC TCCCTCCCCT CCCCCATGAC AGCAACAAGC TTGTTTCTCT
  TTCTCATCAC TGAAGAAGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47419734	NES11495089	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30156034					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47419734	NES11495089	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:15009470 () rs orientation: forward

Symbol	Name	Function Class
Arhgef10	Rho guanine nucleotide exchange factor 10	within coordinates
Gm16350	predicted gene 16350	1596 bp downstream
Rr660140	regulatory region 660140	1897 bp proximal