rs30156037 SNP Detail

Summary

• ID
  rs30156037
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:15009482 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGCCAGGC ACTGGCTGCC
  TCTCTCTAGT GCAGTGAATC TTCCTCCAGT ACAAGGCTTG GGTTCTGCTG GAAGTCCATG
  CGGGAGCTGT CTGAGCTGCA TCTTCTCATG CACTGTGTCT TCCGCATCAG CACCCGCATC
  TGCATCCTCA ACCTTCCTGT CAAGTTACAG AGGAGTTCTG TGCTTGAGCC TCACAATCCA
  K
  CCTTTGCCAG CTTCAGGCTT TTCTAGTCCT GCCTTCACGG GATTGGGATT GAAGACAGTT
  GGCGTCTCTT CACTTGGCTG ACTTGAGGAA ATGCTGTAGC CGGCCCATTT GATCCCCTGC
  ATCCTCCCTC CCTCCCCTCC CCCATGACAG CAACAAGCTT GTTTCTCTTT CTCATCACTG
  AAGAAGGAGG ACTTTTTCTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47419737	NES11495090	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	T	G	T	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30156037					SNP	G	G	G	G	G	G	G	G	G	G	T	G	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47419737	NES11495090	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:15009482 () rs orientation: forward

Symbol	Name	Function Class
Arhgef10	Rho guanine nucleotide exchange factor 10	within coordinates
Gm16350	predicted gene 16350	1584 bp downstream
Rr400772	regulatory region 400772	1998 bp upstream
Rr660140	regulatory region 660140	1885 bp proximal