rs30163650 SNP Detail

Summary

• ID
  rs30163650
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:27369033 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATATCAGTT CACAGCAGCT
  ATGGTTACCT GCAGAAGATC AGCCAGTCAA CATCCCAGCA CAGAGGGGGT GGGGCTCTCA
  AAGTCTCATC CCCACATAAG GAAAGCTACT GGCAGTTGAT GCCTGCAGAG GAAGGGAGAA
  TTATTCTCCT TGGGGGTTGT GGTTGCTGAC AGGTTGCCCA TGATCCAGTA GATGGCTACA
  Y
  ACTCATGTGT TTTGAACTAA TTCATACAAA ACAAAAAAGA GGGCATGCAT CTGGAAATGA
  CGTGGAGTTG GGACACTAGA GGGGGCTGGA GAGAGTCTGT GGTAGATGCA CACAGTCAGT
  ACACATAGTC TGTCCTAGTT AGCACTCTTT GCTGTTGTAA AACATTGACC AAAACTCACT
  TGAGGGGGGG AAAAGTATTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45401673	mCV24241794	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss134703844	ENSMUSSNP3574841	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30163650					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:27369033 () rs orientation: forward

Symbol	Name	Function Class
Rr574391	regulatory region 574391	within coordinates
Rr574392	regulatory region 574392	1840 bp proximal