rs30164086 SNP Detail

Summary

• ID
  rs30164086
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:65940445 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTTT AAATACCTTG TCATCTCAGT
  R
  TATACAGGAC ACCCTGCTGT GCTAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39653755	mCV23207164	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss147320193	ENSMUSSNP2460687	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30164086					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:65940445 () rs orientation: forward

Symbol	Name	Function Class
Rr539619	regulatory region 539619	1191 bp distal
Sec11c	SEC11 homolog C, signal peptidase complex subunit	within coordinates
Tssr151702	transcription start site region 151702	1237 bp downstream