rs30165985 SNP Detail

Summary

• ID
  rs30165985
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62748044 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGCA GCATCCTCTG GTGCCAACAG
  S
  CACTTCTTTT CATGGCTTCT TTGAT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39654165	mCV24030079	ABI	CRAMUS_MOUSE	f	SNP	C	G	C	C
ss147273283	ENSMUSSNP3865905	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G		C
ss325650766	CHEV_18_62774627	CHEVERUD	SCREENING_POP	f	SNP					C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30165985					SNP	C	G	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62748044 () rs orientation: forward

Symbol	Name	Function Class
Spink10	serine peptidase inhibitor, Kazal type 10	within coordinates
Spink13	serine peptidase inhibitor, Kazal type 13	within coordinates
Tssr153633	transcription start site region 153633	703 bp downstream
Tssr153634	transcription start site region 153634	744 bp downstream
Tssr153635	transcription start site region 153635	769 bp downstream