rs30168707 SNP Detail

Summary

• ID
  rs30168707
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:30174662 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGTT GGAGTGGGCA CCAGAGGCTC
  S
  CCACTCGTCC TAACCCACCT TTGCC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45901030	mCV24692108	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	C
ss133095171	ENSMUSSNP1309512	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss321776220	CHEV_6_30124663	CHEVERUD	SCREENING_POP	f	SNP					C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30168707					SNP	C	C	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:30174662 () rs orientation: forward

Symbol	Name	Function Class
BB283400	expressed sequence BB283400	1960 bp upstream
Cpgi17248	CpG island 17248	within coordinates
Mirc35hg	microRNA cluster 35, host gene	538 bp upstream
Rncr4	retina expressed non-coding RNA 4	within coordinates
Rr146074	regulatory region 146074	within coordinates
Tssr55327	transcription start site region 55327	1793 bp downstream
Tssr55328	transcription start site region 55328	594 bp upstream
Tssr55329	transcription start site region 55329	614 bp upstream
Tssr55330	transcription start site region 55330	662 bp upstream
Tssr55331	transcription start site region 55331	694 bp upstream
Tssr55332	transcription start site region 55332	717 bp upstream
Tssr55333	transcription start site region 55333	1152 bp upstream
Tssr55334	transcription start site region 55334	1818 bp upstream
Tssr60107	transcription start site region 60107	584 bp upstream
Tssr60108	transcription start site region 60108	554 bp upstream
Tssr60109	transcription start site region 60109	527 bp upstream
Tssr60110	transcription start site region 60110	65 bp downstream
Tssr60111	transcription start site region 60111	1070 bp downstream